Protein–RNA interactions for Protein: P59913

Pcmtd1, Protein-L-isoaspartate O-methyltransferase domain-containing protein 1, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcmtd1P59913 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcmtd1P59913 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcmtd1P59913 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcmtd1P59913 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.58■□□□□ 0.4
Pcmtd1P59913 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcmtd1P59913 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.57■□□□□ 0.4
Pcmtd1P59913 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.57■□□□□ 0.4
Pcmtd1P59913 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcmtd1P59913 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcmtd1P59913 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcmtd1P59913 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.55■□□□□ 0.4
Pcmtd1P59913 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Pcmtd1P59913 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcmtd1P59913 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcmtd1P59913 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcmtd1P59913 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcmtd1P59913 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcmtd1P59913 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcmtd1P59913 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcmtd1P59913 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcmtd1P59913 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Pcmtd1P59913 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms