Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CckbrP56481 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
CckbrP56481 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CckbrP56481 Gm27628-201ENSMUST00000184911 107 ntBASIC14.04□□□□□ -0.16
CckbrP56481 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.04□□□□□ -0.16
CckbrP56481 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CckbrP56481 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.04□□□□□ -0.16
CckbrP56481 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CckbrP56481 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CckbrP56481 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CckbrP56481 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CckbrP56481 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CckbrP56481 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.03□□□□□ -0.16
CckbrP56481 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.03□□□□□ -0.16
CckbrP56481 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.03□□□□□ -0.16
CckbrP56481 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.03□□□□□ -0.16
CckbrP56481 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.03□□□□□ -0.16
CckbrP56481 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.03□□□□□ -0.16
CckbrP56481 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.03□□□□□ -0.16
CckbrP56481 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.03□□□□□ -0.16
CckbrP56481 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.03□□□□□ -0.16
CckbrP56481 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.03□□□□□ -0.16
CckbrP56481 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.03□□□□□ -0.16
CckbrP56481 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.03□□□□□ -0.16
CckbrP56481 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CckbrP56481 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CckbrP56481 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CckbrP56481 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CckbrP56481 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CckbrP56481 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CckbrP56481 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
CckbrP56481 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CckbrP56481 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
CckbrP56481 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.02□□□□□ -0.16
CckbrP56481 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CckbrP56481 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CckbrP56481 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CckbrP56481 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CckbrP56481 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.02□□□□□ -0.16
CckbrP56481 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CckbrP56481 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CckbrP56481 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Gm10499-201ENSMUST00000174094 934 ntBASIC14.02□□□□□ -0.17
CckbrP56481 Gm4899-201ENSMUST00000178708 719 ntBASIC14.02□□□□□ -0.17
CckbrP56481 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.02□□□□□ -0.17
CckbrP56481 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.02□□□□□ -0.17
CckbrP56481 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.02□□□□□ -0.17
CckbrP56481 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.02□□□□□ -0.17
CckbrP56481 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CckbrP56481 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CckbrP56481 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.02□□□□□ -0.17
CckbrP56481 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CckbrP56481 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CckbrP56481 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CckbrP56481 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CckbrP56481 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CckbrP56481 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CckbrP56481 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CckbrP56481 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CckbrP56481 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms