Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.29■□□□□ 0.2
Nub1P54729 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.29■□□□□ 0.2
Nub1P54729 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.29■□□□□ 0.2
Nub1P54729 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.29■□□□□ 0.2
Nub1P54729 Gm7787-201ENSMUST00000216858 688 ntBASIC16.29■□□□□ 0.2
Nub1P54729 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Nub1P54729 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nub1P54729 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Nub1P54729 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.28■□□□□ 0.2
Nub1P54729 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.28■□□□□ 0.2
Nub1P54729 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nub1P54729 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.28■□□□□ 0.2
Nub1P54729 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.28■□□□□ 0.2
Nub1P54729 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.28■□□□□ 0.2
Nub1P54729 Gm44487-201ENSMUST00000205145 325 ntBASIC16.28■□□□□ 0.2
Nub1P54729 Gm44771-201ENSMUST00000206975 626 ntBASIC16.28■□□□□ 0.2
Nub1P54729 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.28■□□□□ 0.2
Nub1P54729 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.28■□□□□ 0.2
Nub1P54729 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nub1P54729 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nub1P54729 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.27■□□□□ 0.2
Nub1P54729 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nub1P54729 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nub1P54729 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Nub1P54729 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nub1P54729 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nub1P54729 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nub1P54729 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.27■□□□□ 0.2
Nub1P54729 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nub1P54729 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nub1P54729 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nub1P54729 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nub1P54729 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nub1P54729 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nub1P54729 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nub1P54729 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.27■□□□□ 0.19
Nub1P54729 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nub1P54729 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nub1P54729 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nub1P54729 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nub1P54729 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nub1P54729 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nub1P54729 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nub1P54729 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Gm1401-201ENSMUST00000122048 772 ntBASIC16.26■□□□□ 0.19
Nub1P54729 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.26■□□□□ 0.19
Nub1P54729 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nub1P54729 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Gm27300-201ENSMUST00000184085 97 ntBASIC16.26■□□□□ 0.19
Nub1P54729 Gm27335-201ENSMUST00000184758 97 ntBASIC16.26■□□□□ 0.19
Nub1P54729 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.26■□□□□ 0.19
Nub1P54729 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.26■□□□□ 0.19
Nub1P54729 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.26■□□□□ 0.19
Nub1P54729 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nub1P54729 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms