Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc3P49135 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc3P49135 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ercc3P49135 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc3P49135 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc3P49135 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ercc3P49135 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ercc3P49135 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.97■□□□□ 0.47
Ercc3P49135 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.97■□□□□ 0.47
Ercc3P49135 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.97■□□□□ 0.47
Ercc3P49135 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.97■□□□□ 0.47
Ercc3P49135 Gm9727-201ENSMUST00000161387 555 ntBASIC17.97■□□□□ 0.47
Ercc3P49135 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.97■□□□□ 0.47
Ercc3P49135 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.97■□□□□ 0.47
Ercc3P49135 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.97■□□□□ 0.47
Ercc3P49135 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ercc3P49135 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.97■□□□□ 0.47
Ercc3P49135 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.97■□□□□ 0.47
Ercc3P49135 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ercc3P49135 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ercc3P49135 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.96■□□□□ 0.47
Ercc3P49135 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ercc3P49135 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ercc3P49135 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ercc3P49135 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
Ercc3P49135 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Ercc3P49135 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ercc3P49135 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ercc3P49135 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ercc3P49135 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.95■□□□□ 0.46
Ercc3P49135 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ercc3P49135 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ercc3P49135 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.95■□□□□ 0.46
Ercc3P49135 Gm17968-201ENSMUST00000194902 784 ntBASIC17.95■□□□□ 0.46
Ercc3P49135 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
Ercc3P49135 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ercc3P49135 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc3P49135 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc3P49135 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc3P49135 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ercc3P49135 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc3P49135 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.94■□□□□ 0.46
Ercc3P49135 Gm14494-201ENSMUST00000118786 435 ntBASIC17.94■□□□□ 0.46
Ercc3P49135 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.94■□□□□ 0.46
Ercc3P49135 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.94■□□□□ 0.46
Ercc3P49135 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc3P49135 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc3P49135 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.94■□□□□ 0.46
Ercc3P49135 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc3P49135 Gm5264-201ENSMUST00000190584 848 ntBASIC17.94■□□□□ 0.46
Ercc3P49135 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ercc3P49135 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.94■□□□□ 0.46
Ercc3P49135 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc3P49135 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc3P49135 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms