Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rfx3P48381 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx3P48381 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx3P48381 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx3P48381 Gm12134-201ENSMUST00000122109 520 ntBASIC13.71□□□□□ -0.21
Rfx3P48381 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx3P48381 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.71□□□□□ -0.21
Rfx3P48381 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx3P48381 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.71□□□□□ -0.21
Rfx3P48381 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx3P48381 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx3P48381 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx3P48381 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfx3P48381 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfx3P48381 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfx3P48381 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfx3P48381 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfx3P48381 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfx3P48381 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.7□□□□□ -0.22
Rfx3P48381 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rfx3P48381 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rfx3P48381 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.7□□□□□ -0.22
Rfx3P48381 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rfx3P48381 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.7□□□□□ -0.22
Rfx3P48381 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.7□□□□□ -0.22
Rfx3P48381 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.7□□□□□ -0.22
Rfx3P48381 Ank2-226ENSMUST00000189368 339 ntBASIC13.7□□□□□ -0.22
Rfx3P48381 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Gm7506-201ENSMUST00000207758 815 ntBASIC13.7□□□□□ -0.22
Rfx3P48381 Gm19164-201ENSMUST00000210667 640 ntBASIC13.7□□□□□ -0.22
Rfx3P48381 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.7□□□□□ -0.22
Rfx3P48381 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.7□□□□□ -0.22
Rfx3P48381 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.7□□□□□ -0.22
Rfx3P48381 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rfx3P48381 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rfx3P48381 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx3P48381 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rfx3P48381 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.69□□□□□ -0.22
Rfx3P48381 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rfx3P48381 Gm4459-201ENSMUST00000118750 468 ntBASIC13.69□□□□□ -0.22
Rfx3P48381 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.69□□□□□ -0.22
Rfx3P48381 Gm27741-201ENSMUST00000185060 237 ntBASIC13.69□□□□□ -0.22
Rfx3P48381 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Rfx3P48381 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Gm18622-201ENSMUST00000219361 595 ntBASIC13.69□□□□□ -0.22
Rfx3P48381 Gm8655-201ENSMUST00000221159 852 ntBASIC13.69□□□□□ -0.22
Rfx3P48381 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Rfx3P48381 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rfx3P48381 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx3P48381 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rfx3P48381 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfx3P48381 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.68□□□□□ -0.22
Rfx3P48381 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.68□□□□□ -0.22
Rfx3P48381 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rfx3P48381 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rfx3P48381 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Gm12644-201ENSMUST00000119935 606 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms