Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdx2P43241 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx2P43241 Syt7-205ENSMUST00000224135 1557 ntBASIC14.33□□□□□ -0.12
Cdx2P43241 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx2P43241 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.33□□□□□ -0.12
Cdx2P43241 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx2P43241 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx2P43241 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx2P43241 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx2P43241 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx2P43241 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx2P43241 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cdx2P43241 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Gm14719-201ENSMUST00000121891 340 ntBASIC14.32□□□□□ -0.12
Cdx2P43241 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.32□□□□□ -0.12
Cdx2P43241 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Cdx2P43241 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Gm44855-201ENSMUST00000205725 362 ntBASIC14.32□□□□□ -0.12
Cdx2P43241 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.32□□□□□ -0.12
Cdx2P43241 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.32□□□□□ -0.12
Cdx2P43241 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cdx2P43241 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx2P43241 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cdx2P43241 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.31□□□□□ -0.12
Cdx2P43241 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cdx2P43241 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.31□□□□□ -0.12
Cdx2P43241 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Gm27533-201ENSMUST00000183800 152 ntBASIC14.31□□□□□ -0.12
Cdx2P43241 Gm44344-201ENSMUST00000200287 129 ntBASIC14.31□□□□□ -0.12
Cdx2P43241 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.31□□□□□ -0.12
Cdx2P43241 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.31□□□□□ -0.12
Cdx2P43241 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cdx2P43241 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx2P43241 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.3□□□□□ -0.12
Cdx2P43241 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.3□□□□□ -0.12
Cdx2P43241 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdx2P43241 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Gm7775-201ENSMUST00000218871 853 ntBASIC14.3□□□□□ -0.12
Cdx2P43241 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.3□□□□□ -0.12
Cdx2P43241 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.3□□□□□ -0.12
Cdx2P43241 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Syt7-204ENSMUST00000223586 1344 ntBASIC14.3□□□□□ -0.12
Cdx2P43241 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx2P43241 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms