Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.91□□□□□ -0.02
Cd9P40240 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.91□□□□□ -0.02
Cd9P40240 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd9P40240 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.9□□□□□ -0.02
Cd9P40240 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.9□□□□□ -0.02
Cd9P40240 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cd9P40240 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.9□□□□□ -0.02
Cd9P40240 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd9P40240 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cd9P40240 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.89□□□□□ -0.03
Cd9P40240 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
Cd9P40240 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cd9P40240 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.89□□□□□ -0.03
Cd9P40240 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cd9P40240 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.89□□□□□ -0.03
Cd9P40240 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cd9P40240 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.89□□□□□ -0.03
Cd9P40240 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.89□□□□□ -0.03
Cd9P40240 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.89□□□□□ -0.03
Cd9P40240 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cd9P40240 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Gm2651-201ENSMUST00000203560 838 ntBASIC14.89□□□□□ -0.03
Cd9P40240 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.89□□□□□ -0.03
Cd9P40240 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd9P40240 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cd9P40240 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cd9P40240 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cd9P40240 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Cd9P40240 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.88□□□□□ -0.03
Cd9P40240 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd9P40240 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.88□□□□□ -0.03
Cd9P40240 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.88□□□□□ -0.03
Cd9P40240 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.88□□□□□ -0.03
Cd9P40240 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cd9P40240 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms