Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cxcl12P40224 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.52■□□□□ 0.08
Cxcl12P40224 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cxcl12P40224 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Cxcl12P40224 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.52■□□□□ 0.08
Cxcl12P40224 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.52■□□□□ 0.08
Cxcl12P40224 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.52■□□□□ 0.08
Cxcl12P40224 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cxcl12P40224 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.52■□□□□ 0.08
Cxcl12P40224 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.52■□□□□ 0.08
Cxcl12P40224 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cxcl12P40224 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Cxcl12P40224 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cxcl12P40224 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cxcl12P40224 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cxcl12P40224 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cxcl12P40224 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cxcl12P40224 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cxcl12P40224 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.51■□□□□ 0.07
Cxcl12P40224 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cxcl12P40224 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Gm9522-201ENSMUST00000182394 926 ntBASIC15.51■□□□□ 0.07
Cxcl12P40224 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.51■□□□□ 0.07
Cxcl12P40224 Gm43703-201ENSMUST00000200523 763 ntBASIC15.51■□□□□ 0.07
Cxcl12P40224 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.51■□□□□ 0.07
Cxcl12P40224 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Cxcl12P40224 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cxcl12P40224 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Cxcl12P40224 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cxcl12P40224 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.5■□□□□ 0.07
Cxcl12P40224 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.5■□□□□ 0.07
Cxcl12P40224 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Cxcl12P40224 Gm17150-201ENSMUST00000165577 381 ntBASIC15.5■□□□□ 0.07
Cxcl12P40224 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.5■□□□□ 0.07
Cxcl12P40224 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.5■□□□□ 0.07
Cxcl12P40224 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cxcl12P40224 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cxcl12P40224 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cxcl12P40224 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.49■□□□□ 0.07
Cxcl12P40224 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Cxcl12P40224 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.49■□□□□ 0.07
Cxcl12P40224 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Cxcl12P40224 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.49■□□□□ 0.07
Cxcl12P40224 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms