Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Sox5P35710 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.56■□□□□ 0.24
Sox5P35710 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.56■□□□□ 0.24
Sox5P35710 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.56■□□□□ 0.24
Sox5P35710 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sox5P35710 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Carlr-201ENSMUST00000181515 2574 ntBASIC16.56■□□□□ 0.24
Sox5P35710 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sox5P35710 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sox5P35710 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sox5P35710 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox5P35710 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sox5P35710 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sox5P35710 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.55■□□□□ 0.24
Sox5P35710 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sox5P35710 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox5P35710 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sox5P35710 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sox5P35710 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.54■□□□□ 0.24
Sox5P35710 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sox5P35710 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Sox5P35710 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sox5P35710 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.54■□□□□ 0.24
Sox5P35710 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.54■□□□□ 0.24
Sox5P35710 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sox5P35710 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sox5P35710 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sox5P35710 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox5P35710 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.53■□□□□ 0.24
Sox5P35710 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.53■□□□□ 0.24
Sox5P35710 Gm8097-201ENSMUST00000117903 829 ntBASIC16.53■□□□□ 0.24
Sox5P35710 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.53■□□□□ 0.24
Sox5P35710 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.53■□□□□ 0.24
Sox5P35710 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sox5P35710 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox5P35710 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms