Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.06□□□□□ -0.16
Nedd8P29595 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nedd8P29595 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.05□□□□□ -0.16
Nedd8P29595 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nedd8P29595 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nedd8P29595 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nedd8P29595 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nedd8P29595 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.05□□□□□ -0.16
Nedd8P29595 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nedd8P29595 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nedd8P29595 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Gm11336-201ENSMUST00000118168 334 ntBASIC14.04□□□□□ -0.16
Nedd8P29595 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.04□□□□□ -0.16
Nedd8P29595 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Gm23547-201ENSMUST00000158210 271 ntBASIC14.04□□□□□ -0.16
Nedd8P29595 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.04□□□□□ -0.16
Nedd8P29595 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nedd8P29595 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nedd8P29595 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Acot6-202ENSMUST00000222921 3622 ntBASIC14.03□□□□□ -0.16
Nedd8P29595 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.03□□□□□ -0.16
Nedd8P29595 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Nedd8P29595 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.03□□□□□ -0.16
Nedd8P29595 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.03□□□□□ -0.16
Nedd8P29595 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.03□□□□□ -0.16
Nedd8P29595 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.03□□□□□ -0.16
Nedd8P29595 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Nedd8P29595 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd8P29595 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd8P29595 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Nedd8P29595 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Nedd8P29595 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd8P29595 Matn2-206ENSMUST00000228570 2798 ntBASIC14.02□□□□□ -0.16
Nedd8P29595 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd8P29595 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd8P29595 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd8P29595 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd8P29595 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd8P29595 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.02□□□□□ -0.17
Nedd8P29595 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nedd8P29595 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd8P29595 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms