Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.22■□□□□ 0.03
RxrbP28704 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RxrbP28704 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RxrbP28704 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.22■□□□□ 0.03
RxrbP28704 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
RxrbP28704 Gm6345-202ENSMUST00000180900 204 ntBASIC15.22■□□□□ 0.03
RxrbP28704 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.22■□□□□ 0.03
RxrbP28704 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.22■□□□□ 0.03
RxrbP28704 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RxrbP28704 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RxrbP28704 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.22■□□□□ 0.03
RxrbP28704 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Celf4-206ENSMUST00000224553 1729 ntBASIC15.22■□□□□ 0.03
RxrbP28704 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.22■□□□□ 0.03
RxrbP28704 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.22■□□□□ 0.03
RxrbP28704 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.22■□□□□ 0.03
RxrbP28704 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RxrbP28704 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RxrbP28704 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.21■□□□□ 0.03
RxrbP28704 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RxrbP28704 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.21■□□□□ 0.03
RxrbP28704 Gm25406-201ENSMUST00000157599 105 ntBASIC15.21■□□□□ 0.03
RxrbP28704 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RxrbP28704 Gm29518-201ENSMUST00000190858 372 ntBASIC15.21■□□□□ 0.03
RxrbP28704 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RxrbP28704 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RxrbP28704 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.21■□□□□ 0.03
RxrbP28704 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RxrbP28704 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RxrbP28704 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RxrbP28704 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RxrbP28704 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
RxrbP28704 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RxrbP28704 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.2■□□□□ 0.02
RxrbP28704 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RxrbP28704 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RxrbP28704 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Gm17808-201ENSMUST00000200859 894 ntBASIC15.2■□□□□ 0.02
RxrbP28704 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.2■□□□□ 0.02
RxrbP28704 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.2■□□□□ 0.02
RxrbP28704 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.2■□□□□ 0.02
RxrbP28704 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RxrbP28704 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.2■□□□□ 0.02
RxrbP28704 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RxrbP28704 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RxrbP28704 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RxrbP28704 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RxrbP28704 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RxrbP28704 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RxrbP28704 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.19■□□□□ 0.02
RxrbP28704 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RxrbP28704 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.19■□□□□ 0.02
RxrbP28704 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms