Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.98□□□□□ -0.17
Cd40lgP27548 Gm15358-201ENSMUST00000119249 520 ntBASIC13.98□□□□□ -0.17
Cd40lgP27548 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Cd40lgP27548 Gm43514-201ENSMUST00000198852 424 ntBASIC13.98□□□□□ -0.17
Cd40lgP27548 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.98□□□□□ -0.17
Cd40lgP27548 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cd40lgP27548 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cd40lgP27548 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.98□□□□□ -0.17
Cd40lgP27548 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.98□□□□□ -0.17
Cd40lgP27548 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.98□□□□□ -0.17
Cd40lgP27548 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cd40lgP27548 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cd40lgP27548 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cd40lgP27548 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cd40lgP27548 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cd40lgP27548 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Mir5126-201ENSMUST00000175513 77 ntBASIC13.97□□□□□ -0.17
Cd40lgP27548 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.97□□□□□ -0.17
Cd40lgP27548 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.97□□□□□ -0.17
Cd40lgP27548 Gm18206-201ENSMUST00000207027 926 ntBASIC13.97□□□□□ -0.17
Cd40lgP27548 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.97□□□□□ -0.17
Cd40lgP27548 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.97□□□□□ -0.17
Cd40lgP27548 Gm7787-201ENSMUST00000216858 688 ntBASIC13.97□□□□□ -0.17
Cd40lgP27548 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cd40lgP27548 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
Cd40lgP27548 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cd40lgP27548 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cd40lgP27548 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cd40lgP27548 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cd40lgP27548 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cd40lgP27548 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cd40lgP27548 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cd40lgP27548 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.96□□□□□ -0.17
Cd40lgP27548 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.96□□□□□ -0.17
Cd40lgP27548 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.96□□□□□ -0.17
Cd40lgP27548 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.96□□□□□ -0.17
Cd40lgP27548 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Gm15590-201ENSMUST00000078419 552 ntBASIC13.96□□□□□ -0.17
Cd40lgP27548 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cd40lgP27548 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cd40lgP27548 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.96□□□□□ -0.18
Cd40lgP27548 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cd40lgP27548 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cd40lgP27548 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cd40lgP27548 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.96□□□□□ -0.18
Cd40lgP27548 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cd40lgP27548 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cd40lgP27548 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cd40lgP27548 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.95□□□□□ -0.18
Cd40lgP27548 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms