Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NdnP25233 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NdnP25233 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
NdnP25233 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NdnP25233 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
NdnP25233 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NdnP25233 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NdnP25233 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NdnP25233 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.19□□□□□ -0.46
NdnP25233 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NdnP25233 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NdnP25233 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NdnP25233 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NdnP25233 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NdnP25233 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NdnP25233 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.18□□□□□ -0.46
NdnP25233 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NdnP25233 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NdnP25233 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
NdnP25233 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
NdnP25233 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NdnP25233 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.17□□□□□ -0.46
NdnP25233 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Gm5643-201ENSMUST00000117081 966 ntBASIC12.17□□□□□ -0.46
NdnP25233 Gm24841-201ENSMUST00000158676 357 ntBASIC12.17□□□□□ -0.46
NdnP25233 Gm17661-201ENSMUST00000170317 270 ntBASIC12.17□□□□□ -0.46
NdnP25233 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Gm43183-201ENSMUST00000200632 547 ntBASIC12.17□□□□□ -0.46
NdnP25233 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NdnP25233 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms