Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf1bP25119 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.02□□□□□ -0.16
Tnfrsf1bP25119 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf1bP25119 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf1bP25119 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Tnfrsf1bP25119 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf1bP25119 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf1bP25119 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf1bP25119 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf1bP25119 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfrsf1bP25119 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf1bP25119 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Gm9727-201ENSMUST00000161387 555 ntBASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf1bP25119 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Gm5049-201ENSMUST00000195878 1590 ntBASIC14□□□□□ -0.17
Tnfrsf1bP25119 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf1bP25119 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms