Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.53■□□□□ 0.24
Pde6bP23440 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6bP23440 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6bP23440 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6bP23440 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6bP23440 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6bP23440 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6bP23440 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pde6bP23440 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6bP23440 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pde6bP23440 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Pde6bP23440 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6bP23440 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6bP23440 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pde6bP23440 Gm8318-201ENSMUST00000182954 872 ntBASIC16.52■□□□□ 0.24
Pde6bP23440 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.52■□□□□ 0.24
Pde6bP23440 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.52■□□□□ 0.24
Pde6bP23440 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.52■□□□□ 0.24
Pde6bP23440 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.52■□□□□ 0.24
Pde6bP23440 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pde6bP23440 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6bP23440 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Pde6bP23440 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6bP23440 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6bP23440 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6bP23440 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6bP23440 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pde6bP23440 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pde6bP23440 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.51■□□□□ 0.23
Pde6bP23440 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pde6bP23440 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pde6bP23440 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.51■□□□□ 0.23
Pde6bP23440 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Pde6bP23440 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pde6bP23440 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6bP23440 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.5■□□□□ 0.23
Pde6bP23440 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.5■□□□□ 0.23
Pde6bP23440 Gm14722-201ENSMUST00000118943 689 ntBASIC16.5■□□□□ 0.23
Pde6bP23440 Gm13616-201ENSMUST00000120600 222 ntBASIC16.5■□□□□ 0.23
Pde6bP23440 Gm14057-201ENSMUST00000120631 482 ntBASIC16.5■□□□□ 0.23
Pde6bP23440 Gm11745-201ENSMUST00000121669 448 ntBASIC16.5■□□□□ 0.23
Pde6bP23440 Rprl2-201ENSMUST00000157150 290 ntBASIC16.5■□□□□ 0.23
Pde6bP23440 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Pde6bP23440 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.5■□□□□ 0.23
Pde6bP23440 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.5■□□□□ 0.23
Pde6bP23440 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pde6bP23440 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.5■□□□□ 0.23
Pde6bP23440 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6bP23440 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pde6bP23440 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pde6bP23440 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pde6bP23440 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pde6bP23440 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pde6bP23440 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.49■□□□□ 0.23
Pde6bP23440 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.49■□□□□ 0.23
Pde6bP23440 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms