Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Clk1P22518 Gm15358-201ENSMUST00000119249 520 ntBASIC14.13□□□□□ -0.15
Clk1P22518 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.13□□□□□ -0.15
Clk1P22518 Gm17971-201ENSMUST00000190239 806 ntBASIC14.13□□□□□ -0.15
Clk1P22518 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.13□□□□□ -0.15
Clk1P22518 Rps4l-201ENSMUST00000071745 943 ntBASIC14.13□□□□□ -0.15
Clk1P22518 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Clk1P22518 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.13□□□□□ -0.15
Clk1P22518 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Clk1P22518 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Clk1P22518 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Clk1P22518 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.12□□□□□ -0.15
Clk1P22518 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Clk1P22518 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.12□□□□□ -0.15
Clk1P22518 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clk1P22518 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.12□□□□□ -0.15
Clk1P22518 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.12□□□□□ -0.15
Clk1P22518 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Clk1P22518 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Clk1P22518 Gm10819-201ENSMUST00000099988 561 ntBASIC14.12□□□□□ -0.15
Clk1P22518 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.12□□□□□ -0.15
Clk1P22518 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.12□□□□□ -0.15
Clk1P22518 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clk1P22518 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clk1P22518 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Clk1P22518 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.11□□□□□ -0.15
Clk1P22518 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Clk1P22518 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.11□□□□□ -0.15
Clk1P22518 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.11□□□□□ -0.15
Clk1P22518 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.11□□□□□ -0.15
Clk1P22518 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.11□□□□□ -0.15
Clk1P22518 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Clk1P22518 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.11□□□□□ -0.15
Clk1P22518 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clk1P22518 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.11□□□□□ -0.15
Clk1P22518 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clk1P22518 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Gm24589-201ENSMUST00000116692 94 ntBASIC14.1□□□□□ -0.15
Clk1P22518 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Clk1P22518 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.1□□□□□ -0.15
Clk1P22518 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms