Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.54□□□□□ -0.08
BdnfP21237 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.54□□□□□ -0.08
BdnfP21237 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BdnfP21237 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.53□□□□□ -0.08
BdnfP21237 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
BdnfP21237 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BdnfP21237 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Gm15165-201ENSMUST00000118140 502 ntBASIC14.53□□□□□ -0.08
BdnfP21237 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
BdnfP21237 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.53□□□□□ -0.08
BdnfP21237 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.53□□□□□ -0.08
BdnfP21237 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.53□□□□□ -0.08
BdnfP21237 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.53□□□□□ -0.08
BdnfP21237 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BdnfP21237 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.53□□□□□ -0.08
BdnfP21237 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BdnfP21237 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BdnfP21237 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BdnfP21237 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BdnfP21237 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
BdnfP21237 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BdnfP21237 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.52□□□□□ -0.08
BdnfP21237 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
BdnfP21237 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BdnfP21237 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BdnfP21237 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BdnfP21237 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
BdnfP21237 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.52□□□□□ -0.08
BdnfP21237 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
BdnfP21237 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.52□□□□□ -0.09
BdnfP21237 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.52□□□□□ -0.09
BdnfP21237 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.52□□□□□ -0.09
BdnfP21237 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BdnfP21237 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
BdnfP21237 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
BdnfP21237 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
BdnfP21237 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.51□□□□□ -0.09
BdnfP21237 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
BdnfP21237 Gm7506-201ENSMUST00000207758 815 ntBASIC14.51□□□□□ -0.09
BdnfP21237 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.51□□□□□ -0.09
BdnfP21237 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
BdnfP21237 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.51□□□□□ -0.09
BdnfP21237 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.51□□□□□ -0.09
BdnfP21237 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.51□□□□□ -0.09
BdnfP21237 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BdnfP21237 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms