Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.29□□□□□ -0.12
TP20293 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.29□□□□□ -0.12
TP20293 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TP20293 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TP20293 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TP20293 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TP20293 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TP20293 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TP20293 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TP20293 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TP20293 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.28□□□□□ -0.12
TP20293 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.28□□□□□ -0.12
TP20293 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TP20293 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.27□□□□□ -0.12
TP20293 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TP20293 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.27□□□□□ -0.12
TP20293 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TP20293 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.27□□□□□ -0.12
TP20293 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
TP20293 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TP20293 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TP20293 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TP20293 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TP20293 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.27□□□□□ -0.12
TP20293 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TP20293 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TP20293 Gm18195-201ENSMUST00000207604 706 ntBASIC14.27□□□□□ -0.13
TP20293 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TP20293 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TP20293 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TP20293 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TP20293 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TP20293 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TP20293 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TP20293 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.27□□□□□ -0.13
TP20293 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TP20293 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TP20293 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.26□□□□□ -0.13
TP20293 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TP20293 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TP20293 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TP20293 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.26□□□□□ -0.13
TP20293 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.26□□□□□ -0.13
TP20293 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TP20293 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.26□□□□□ -0.13
TP20293 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TP20293 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms