Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp53P15975 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.48■□□□□ 0.39
Usp53P15975 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp53P15975 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Usp53P15975 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Usp53P15975 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.48■□□□□ 0.39
Usp53P15975 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.48■□□□□ 0.39
Usp53P15975 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.48■□□□□ 0.39
Usp53P15975 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Usp53P15975 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp53P15975 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp53P15975 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Usp53P15975 Gm14701-201ENSMUST00000117156 348 ntBASIC17.47■□□□□ 0.39
Usp53P15975 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.47■□□□□ 0.39
Usp53P15975 Gm25925-201ENSMUST00000158314 306 ntBASIC17.47■□□□□ 0.39
Usp53P15975 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp53P15975 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp53P15975 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Usp53P15975 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp53P15975 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Usp53P15975 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Usp53P15975 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Usp53P15975 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 BC037039-201ENSMUST00000192003 2205 ntBASIC17.47■□□□□ 0.39
Usp53P15975 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp53P15975 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.46■□□□□ 0.39
Usp53P15975 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp53P15975 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.46■□□□□ 0.39
Usp53P15975 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Usp53P15975 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Usp53P15975 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Usp53P15975 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.46■□□□□ 0.39
Usp53P15975 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Usp53P15975 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp53P15975 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp53P15975 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Usp53P15975 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.46■□□□□ 0.39
Usp53P15975 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Usp53P15975 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.46■□□□□ 0.39
Usp53P15975 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp53P15975 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp53P15975 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp53P15975 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp53P15975 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms