Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.56□□□□□ -0.4
Cxcl1P12850 Celf4-206ENSMUST00000224553 1729 ntBASIC12.56□□□□□ -0.4
Cxcl1P12850 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cxcl1P12850 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.56□□□□□ -0.4
Cxcl1P12850 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.56□□□□□ -0.4
Cxcl1P12850 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cxcl1P12850 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cxcl1P12850 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.55□□□□□ -0.4
Cxcl1P12850 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Mir6982-201ENSMUST00000184354 68 ntBASIC12.55□□□□□ -0.4
Cxcl1P12850 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cxcl1P12850 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cxcl1P12850 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cxcl1P12850 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.55□□□□□ -0.4
Cxcl1P12850 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.55□□□□□ -0.4
Cxcl1P12850 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl1P12850 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.54□□□□□ -0.4
Cxcl1P12850 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl1P12850 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cxcl1P12850 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cxcl1P12850 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cxcl1P12850 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.54□□□□□ -0.4
Cxcl1P12850 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.54□□□□□ -0.4
Cxcl1P12850 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.54□□□□□ -0.4
Cxcl1P12850 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.54□□□□□ -0.4
Cxcl1P12850 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.54□□□□□ -0.4
Cxcl1P12850 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl1P12850 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Grk6-207ENSMUST00000225925 2769 ntBASIC12.54□□□□□ -0.4
Cxcl1P12850 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.54□□□□□ -0.4
Cxcl1P12850 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl1P12850 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cxcl1P12850 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.53□□□□□ -0.4
Cxcl1P12850 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl1P12850 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl1P12850 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Cxcl1P12850 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms