Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RaraP11416 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
RaraP11416 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RaraP11416 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.39■□□□□ 0.21
RaraP11416 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.39■□□□□ 0.21
RaraP11416 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
RaraP11416 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RaraP11416 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.39■□□□□ 0.21
RaraP11416 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.39■□□□□ 0.21
RaraP11416 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RaraP11416 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.38■□□□□ 0.21
RaraP11416 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RaraP11416 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.38■□□□□ 0.21
RaraP11416 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RaraP11416 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RaraP11416 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.38■□□□□ 0.21
RaraP11416 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.38■□□□□ 0.21
RaraP11416 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.38■□□□□ 0.21
RaraP11416 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RaraP11416 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.38■□□□□ 0.21
RaraP11416 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RaraP11416 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.37■□□□□ 0.21
RaraP11416 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
RaraP11416 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.37■□□□□ 0.21
RaraP11416 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.37■□□□□ 0.21
RaraP11416 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.37■□□□□ 0.21
RaraP11416 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.37■□□□□ 0.21
RaraP11416 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RaraP11416 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RaraP11416 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RaraP11416 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RaraP11416 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RaraP11416 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.36■□□□□ 0.21
RaraP11416 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RaraP11416 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RaraP11416 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RaraP11416 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.36■□□□□ 0.21
RaraP11416 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RaraP11416 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RaraP11416 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RaraP11416 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms