Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccl3P10855 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccl3P10855 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
Ccl3P10855 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.33□□□□□ -0.28
Ccl3P10855 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ccl3P10855 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Ccl3P10855 Gm13823-201ENSMUST00000119930 345 ntBASIC13.32□□□□□ -0.28
Ccl3P10855 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccl3P10855 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccl3P10855 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccl3P10855 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccl3P10855 Gm9063-201ENSMUST00000223299 582 ntBASIC13.32□□□□□ -0.28
Ccl3P10855 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.32□□□□□ -0.28
Ccl3P10855 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccl3P10855 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccl3P10855 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl3P10855 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccl3P10855 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccl3P10855 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccl3P10855 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.31□□□□□ -0.28
Ccl3P10855 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccl3P10855 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccl3P10855 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl3P10855 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.31□□□□□ -0.28
Ccl3P10855 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccl3P10855 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccl3P10855 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccl3P10855 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.31□□□□□ -0.28
Ccl3P10855 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl3P10855 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl3P10855 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl3P10855 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.3□□□□□ -0.28
Ccl3P10855 Gm15487-201ENSMUST00000122373 465 ntBASIC13.3□□□□□ -0.28
Ccl3P10855 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms