Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm27533-201ENSMUST00000183800 152 ntBASIC16.75■□□□□ 0.27
Hoxc6P10629 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.75■□□□□ 0.27
Hoxc6P10629 Gm7775-201ENSMUST00000218871 853 ntBASIC16.75■□□□□ 0.27
Hoxc6P10629 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.75■□□□□ 0.27
Hoxc6P10629 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc6P10629 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc6P10629 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Hoxc6P10629 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hoxc6P10629 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc6P10629 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc6P10629 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hoxc6P10629 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.74■□□□□ 0.27
Hoxc6P10629 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.74■□□□□ 0.27
Hoxc6P10629 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.74■□□□□ 0.27
Hoxc6P10629 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.74■□□□□ 0.27
Hoxc6P10629 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Hoxc6P10629 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Hoxc6P10629 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.74■□□□□ 0.27
Hoxc6P10629 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Hoxc6P10629 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Hoxc6P10629 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.74■□□□□ 0.27
Hoxc6P10629 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hoxc6P10629 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Hoxc6P10629 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.73■□□□□ 0.27
Hoxc6P10629 Syt7-204ENSMUST00000223586 1344 ntBASIC16.73■□□□□ 0.27
Hoxc6P10629 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hoxc6P10629 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Gm27838-201ENSMUST00000184829 128 ntBASIC16.73■□□□□ 0.27
Hoxc6P10629 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.73■□□□□ 0.27
Hoxc6P10629 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hoxc6P10629 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.73■□□□□ 0.27
Hoxc6P10629 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hoxc6P10629 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Hoxc6P10629 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hoxc6P10629 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.72■□□□□ 0.27
Hoxc6P10629 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.72■□□□□ 0.27
Hoxc6P10629 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hoxc6P10629 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.72■□□□□ 0.27
Hoxc6P10629 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hoxc6P10629 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
Hoxc6P10629 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hoxc6P10629 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hoxc6P10629 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Gm44344-201ENSMUST00000200287 129 ntBASIC16.71■□□□□ 0.27
Hoxc6P10629 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.71■□□□□ 0.27
Hoxc6P10629 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.71■□□□□ 0.27
Hoxc6P10629 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Hoxc6P10629 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.71■□□□□ 0.27
Hoxc6P10629 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Hoxc6P10629 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc6P10629 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hoxc6P10629 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms