Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccl1P10146 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccl1P10146 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.78□□□□□ -0.52
Ccl1P10146 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccl1P10146 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccl1P10146 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Ccl1P10146 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl1P10146 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.77□□□□□ -0.53
Ccl1P10146 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccl1P10146 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccl1P10146 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
Ccl1P10146 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccl1P10146 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccl1P10146 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccl1P10146 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.77□□□□□ -0.53
Ccl1P10146 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccl1P10146 Gm7213-201ENSMUST00000215977 950 ntBASIC11.77□□□□□ -0.53
Ccl1P10146 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccl1P10146 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Ccl1P10146 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl1P10146 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.76□□□□□ -0.53
Ccl1P10146 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccl1P10146 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccl1P10146 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Gm12527-201ENSMUST00000117967 564 ntBASIC11.76□□□□□ -0.53
Ccl1P10146 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccl1P10146 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccl1P10146 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.76□□□□□ -0.53
Ccl1P10146 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccl1P10146 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl1P10146 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccl1P10146 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl1P10146 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccl1P10146 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl1P10146 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms