Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Polr2aP08775 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2aP08775 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2aP08775 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2aP08775 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2aP08775 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2aP08775 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2aP08775 Gm12390-201ENSMUST00000117897 397 ntBASIC17.03■□□□□ 0.32
Polr2aP08775 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Polr2aP08775 Gm9002-201ENSMUST00000178437 499 ntBASIC17.03■□□□□ 0.32
Polr2aP08775 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2aP08775 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Polr2aP08775 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2aP08775 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2aP08775 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr2aP08775 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.02■□□□□ 0.32
Polr2aP08775 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Polr2aP08775 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Polr2aP08775 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.02■□□□□ 0.32
Polr2aP08775 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.02■□□□□ 0.32
Polr2aP08775 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Polr2aP08775 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Polr2aP08775 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Polr2aP08775 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Polr2aP08775 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Polr2aP08775 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr2aP08775 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2aP08775 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Polr2aP08775 Gm12341-201ENSMUST00000119724 503 ntBASIC17.02■□□□□ 0.31
Polr2aP08775 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2aP08775 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2aP08775 Gm37230-201ENSMUST00000194491 818 ntBASIC17.02■□□□□ 0.31
Polr2aP08775 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.02■□□□□ 0.31
Polr2aP08775 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2aP08775 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Polr2aP08775 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Polr2aP08775 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Polr2aP08775 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.02■□□□□ 0.31
Polr2aP08775 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2aP08775 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Polr2aP08775 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2aP08775 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.01■□□□□ 0.31
Polr2aP08775 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Polr2aP08775 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2aP08775 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.01■□□□□ 0.31
Polr2aP08775 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Polr2aP08775 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2aP08775 Gm27892-201ENSMUST00000185017 106 ntBASIC17.01■□□□□ 0.31
Polr2aP08775 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Polr2aP08775 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.01■□□□□ 0.31
Polr2aP08775 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Polr2aP08775 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2aP08775 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2aP08775 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2aP08775 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2aP08775 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Polr2aP08775 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr2aP08775 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17■□□□□ 0.31
Polr2aP08775 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Polr2aP08775 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17■□□□□ 0.31
Polr2aP08775 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Polr2aP08775 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Polr2aP08775 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Polr2aP08775 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Gm17420-201ENSMUST00000164753 153 ntBASIC17■□□□□ 0.31
Polr2aP08775 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Gm45453-201ENSMUST00000211758 853 ntBASIC17■□□□□ 0.31
Polr2aP08775 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17■□□□□ 0.31
Polr2aP08775 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Polr2aP08775 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr2aP08775 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms