Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sod1P08228 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.15□□□□□ -0.14
Sod1P08228 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.15□□□□□ -0.14
Sod1P08228 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sod1P08228 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sod1P08228 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sod1P08228 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sod1P08228 Gm7730-201ENSMUST00000212486 454 ntBASIC14.15□□□□□ -0.14
Sod1P08228 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Sod1P08228 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sod1P08228 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sod1P08228 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sod1P08228 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sod1P08228 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sod1P08228 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sod1P08228 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sod1P08228 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sod1P08228 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sod1P08228 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.14□□□□□ -0.15
Sod1P08228 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sod1P08228 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sod1P08228 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sod1P08228 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.14□□□□□ -0.15
Sod1P08228 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Gm24543-201ENSMUST00000103867 82 ntBASIC14.14□□□□□ -0.15
Sod1P08228 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.14□□□□□ -0.15
Sod1P08228 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sod1P08228 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.14□□□□□ -0.15
Sod1P08228 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sod1P08228 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.14□□□□□ -0.15
Sod1P08228 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.14□□□□□ -0.15
Sod1P08228 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sod1P08228 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Sod1P08228 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sod1P08228 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sod1P08228 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.13□□□□□ -0.15
Sod1P08228 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.13□□□□□ -0.15
Sod1P08228 Gm7488-201ENSMUST00000117148 684 ntBASIC14.13□□□□□ -0.15
Sod1P08228 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Sod1P08228 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Gm27838-201ENSMUST00000184829 128 ntBASIC14.13□□□□□ -0.15
Sod1P08228 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Sod1P08228 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sod1P08228 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sod1P08228 Syt7-204ENSMUST00000223586 1344 ntBASIC14.13□□□□□ -0.15
Sod1P08228 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sod1P08228 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Sod1P08228 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Sod1P08228 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Gm13464-201ENSMUST00000119418 935 ntBASIC14.12□□□□□ -0.15
Sod1P08228 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.12□□□□□ -0.15
Sod1P08228 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.12□□□□□ -0.15
Sod1P08228 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.12□□□□□ -0.15
Sod1P08228 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.12□□□□□ -0.15
Sod1P08228 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.12□□□□□ -0.15
Sod1P08228 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms