Protein–RNA interactions for Protein: P06327

Gm5629, Ig heavy chain V region VH558 A1/A4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5629P06327 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5629P06327 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
Gm5629P06327 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5629P06327 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5629P06327 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5629P06327 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5629P06327 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Gm5629P06327 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5629P06327 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Gm5629P06327 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5629P06327 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Gm5629P06327 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Gm5629P06327 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Gm5629P06327 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Gm5629P06327 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm5629P06327 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Gm5629P06327 Gm43399-201ENSMUST00000202546 2374 ntBASIC10.89□□□□□ -0.67
Gm5629P06327 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Gm5629P06327 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Gm5587-201ENSMUST00000206270 674 ntBASIC10.89□□□□□ -0.67
Gm5629P06327 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Gm5629P06327 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.89□□□□□ -0.67
Gm5629P06327 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm5629P06327 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Gm5629P06327 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm5629P06327 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm5629P06327 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Gm5629P06327 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5629P06327 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Gm5629P06327 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.88□□□□□ -0.67
Gm5629P06327 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Gm5629P06327 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.88□□□□□ -0.67
Gm5629P06327 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Gm5629P06327 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Gm5629P06327 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.88□□□□□ -0.67
Gm5629P06327 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.88□□□□□ -0.67
Gm5629P06327 Rprl3-201ENSMUST00000157400 290 ntBASIC10.88□□□□□ -0.67
Gm5629P06327 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.88□□□□□ -0.67
Gm5629P06327 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Gm5629P06327 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Gm5629P06327 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.88□□□□□ -0.67
Gm5629P06327 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Gm5629P06327 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Gm5629P06327 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Gm5629P06327 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.88□□□□□ -0.67
Gm5629P06327 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm5629P06327 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.88□□□□□ -0.67
Gm5629P06327 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Gm5629P06327 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.88□□□□□ -0.67
Gm5629P06327 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm5629P06327 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.87□□□□□ -0.67
Gm5629P06327 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm5629P06327 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm5629P06327 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Gm5629P06327 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms