Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1aO89116 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1aO89116 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Vti1aO89116 Gm27301-201ENSMUST00000184012 127 ntBASIC16.32■□□□□ 0.2
Vti1aO89116 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1aO89116 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.32■□□□□ 0.2
Vti1aO89116 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.32■□□□□ 0.2
Vti1aO89116 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1aO89116 Gm44872-201ENSMUST00000207864 420 ntBASIC16.32■□□□□ 0.2
Vti1aO89116 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.32■□□□□ 0.2
Vti1aO89116 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vti1aO89116 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Vti1aO89116 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vti1aO89116 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1aO89116 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1aO89116 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Vti1aO89116 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vti1aO89116 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vti1aO89116 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.31■□□□□ 0.2
Vti1aO89116 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.31■□□□□ 0.2
Vti1aO89116 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vti1aO89116 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.31■□□□□ 0.2
Vti1aO89116 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Gm8396-201ENSMUST00000057361 823 ntBASIC16.31■□□□□ 0.2
Vti1aO89116 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vti1aO89116 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1aO89116 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Vti1aO89116 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vti1aO89116 Gm14057-201ENSMUST00000120631 482 ntBASIC16.3■□□□□ 0.2
Vti1aO89116 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.3■□□□□ 0.2
Vti1aO89116 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.3■□□□□ 0.2
Vti1aO89116 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Vti1aO89116 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Vti1aO89116 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vti1aO89116 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vti1aO89116 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1aO89116 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Vti1aO89116 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.29■□□□□ 0.2
Vti1aO89116 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vti1aO89116 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Vti1aO89116 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.29■□□□□ 0.2
Vti1aO89116 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.29■□□□□ 0.2
Vti1aO89116 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.29■□□□□ 0.2
Vti1aO89116 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.29■□□□□ 0.2
Vti1aO89116 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vti1aO89116 Mir6956-201ENSMUST00000183598 62 ntBASIC16.29■□□□□ 0.2
Vti1aO89116 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.29■□□□□ 0.2
Vti1aO89116 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.29■□□□□ 0.2
Vti1aO89116 Gm45747-201ENSMUST00000212203 999 ntBASIC16.29■□□□□ 0.2
Vti1aO89116 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.29■□□□□ 0.2
Vti1aO89116 Gm18246-201ENSMUST00000221023 728 ntBASIC16.29■□□□□ 0.2
Vti1aO89116 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vti1aO89116 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.29■□□□□ 0.2
Vti1aO89116 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.29■□□□□ 0.2
Vti1aO89116 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1aO89116 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vti1aO89116 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms