Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Gm18669-201ENSMUST00000216049 778 ntBASIC10.75□□□□□ -0.69
Sh2d1aO88890 Gm18622-201ENSMUST00000219361 595 ntBASIC10.75□□□□□ -0.69
Sh2d1aO88890 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.75□□□□□ -0.69
Sh2d1aO88890 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sh2d1aO88890 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.74□□□□□ -0.69
Sh2d1aO88890 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.74□□□□□ -0.69
Sh2d1aO88890 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Gm16425-201ENSMUST00000118143 3130 ntBASIC10.74□□□□□ -0.69
Sh2d1aO88890 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sh2d1aO88890 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.73□□□□□ -0.69
Sh2d1aO88890 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Gm37305-201ENSMUST00000195714 4279 ntBASIC10.73□□□□□ -0.69
Sh2d1aO88890 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.73□□□□□ -0.69
Sh2d1aO88890 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms