Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Tom1O88746 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.88■□□□□ 0.77
Tom1O88746 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.88■□□□□ 0.77
Tom1O88746 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC19.88■□□□□ 0.77
Tom1O88746 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tom1O88746 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Tom1O88746 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC19.87■□□□□ 0.77
Tom1O88746 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC19.87■□□□□ 0.77
Tom1O88746 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC19.87■□□□□ 0.77
Tom1O88746 Gm18753-201ENSMUST00000201000 566 ntBASIC19.87■□□□□ 0.77
Tom1O88746 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tom1O88746 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Gm5912-201ENSMUST00000122282 1438 ntBASIC19.86■□□□□ 0.77
Tom1O88746 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC19.86■□□□□ 0.77
Tom1O88746 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Tom1O88746 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Gm11814-201ENSMUST00000119515 929 ntBASIC19.86■□□□□ 0.77
Tom1O88746 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC19.86■□□□□ 0.77
Tom1O88746 Gm4857-201ENSMUST00000192718 785 ntBASIC19.86■□□□□ 0.77
Tom1O88746 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Gm7561-201ENSMUST00000211203 886 ntBASIC19.86■□□□□ 0.77
Tom1O88746 AC154276.1-201ENSMUST00000228874 1299 ntBASIC19.86■□□□□ 0.77
Tom1O88746 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Tom1O88746 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Tom1O88746 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tom1O88746 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.85■□□□□ 0.77
Tom1O88746 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Gm14723-201ENSMUST00000118686 215 ntBASIC19.85■□□□□ 0.77
Tom1O88746 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC19.85■□□□□ 0.77
Tom1O88746 Gm6013-201ENSMUST00000212264 699 ntBASIC19.85■□□□□ 0.77
Tom1O88746 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC19.85■□□□□ 0.77
Tom1O88746 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC19.85■□□□□ 0.77
Tom1O88746 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Tom1O88746 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC19.85■□□□□ 0.77
Tom1O88746 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tom1O88746 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tom1O88746 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tom1O88746 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.84■□□□□ 0.77
Tom1O88746 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tom1O88746 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC19.84■□□□□ 0.77
Tom1O88746 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tom1O88746 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Tom1O88746 Gm9299-201ENSMUST00000206392 1140 ntBASIC19.84■□□□□ 0.77
Tom1O88746 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tom1O88746 AC156560.2-201ENSMUST00000221232 264 ntBASIC19.84■□□□□ 0.77
Tom1O88746 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tom1O88746 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Tom1O88746 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tom1O88746 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tom1O88746 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tom1O88746 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tom1O88746 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Tom1O88746 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tom1O88746 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tom1O88746 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tom1O88746 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.83■□□□□ 0.77
Tom1O88746 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tom1O88746 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC19.83■□□□□ 0.77
Tom1O88746 Gm5187-201ENSMUST00000117317 991 ntBASIC19.83■□□□□ 0.77
Tom1O88746 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tom1O88746 Mir5132-201ENSMUST00000175166 71 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms