Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ClppO88696 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ClppO88696 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ClppO88696 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ClppO88696 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
ClppO88696 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.79□□□□□ -0.04
ClppO88696 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ClppO88696 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ClppO88696 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.79□□□□□ -0.04
ClppO88696 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
ClppO88696 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
ClppO88696 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.79□□□□□ -0.04
ClppO88696 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClppO88696 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ClppO88696 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ClppO88696 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
ClppO88696 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.78□□□□□ -0.04
ClppO88696 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ClppO88696 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.78□□□□□ -0.04
ClppO88696 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.78□□□□□ -0.04
ClppO88696 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Gm25925-201ENSMUST00000158314 306 ntBASIC14.78□□□□□ -0.04
ClppO88696 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.78□□□□□ -0.04
ClppO88696 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ClppO88696 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.78□□□□□ -0.04
ClppO88696 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClppO88696 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.77□□□□□ -0.04
ClppO88696 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
ClppO88696 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.77□□□□□ -0.04
ClppO88696 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.77□□□□□ -0.04
ClppO88696 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
ClppO88696 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClppO88696 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.77□□□□□ -0.05
ClppO88696 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.77□□□□□ -0.05
ClppO88696 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ClppO88696 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClppO88696 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms