Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vti1bO88384 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.47□□□□□ -0.09
Vti1bO88384 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.47□□□□□ -0.09
Vti1bO88384 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Gm9172-201ENSMUST00000212092 954 ntBASIC14.47□□□□□ -0.09
Vti1bO88384 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.47□□□□□ -0.09
Vti1bO88384 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Vti1bO88384 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.47□□□□□ -0.09
Vti1bO88384 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Vti1bO88384 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.47□□□□□ -0.09
Vti1bO88384 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Vti1bO88384 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1bO88384 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Vti1bO88384 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vti1bO88384 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.46□□□□□ -0.09
Vti1bO88384 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
Vti1bO88384 Gm12644-201ENSMUST00000119935 606 ntBASIC14.46□□□□□ -0.09
Vti1bO88384 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.46□□□□□ -0.09
Vti1bO88384 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.46□□□□□ -0.09
Vti1bO88384 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.46□□□□□ -0.09
Vti1bO88384 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Vti1bO88384 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1bO88384 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1bO88384 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1bO88384 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1bO88384 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1bO88384 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1bO88384 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1bO88384 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1bO88384 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1bO88384 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1bO88384 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vti1bO88384 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vti1bO88384 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.45□□□□□ -0.1
Vti1bO88384 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vti1bO88384 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vti1bO88384 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Vti1bO88384 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vti1bO88384 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.44□□□□□ -0.1
Vti1bO88384 Gm6257-201ENSMUST00000163864 910 ntBASIC14.44□□□□□ -0.1
Vti1bO88384 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.44□□□□□ -0.1
Vti1bO88384 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.44□□□□□ -0.1
Vti1bO88384 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms