Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Slc4a4O88343 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Slc4a4O88343 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc4a4O88343 Gm20553-201ENSMUST00000204205 844 ntBASIC17.84■□□□□ 0.45
Slc4a4O88343 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.84■□□□□ 0.45
Slc4a4O88343 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Slc4a4O88343 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.84■□□□□ 0.45
Slc4a4O88343 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Slc4a4O88343 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Slc4a4O88343 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Slc4a4O88343 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc4a4O88343 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc4a4O88343 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc4a4O88343 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc4a4O88343 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
Slc4a4O88343 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Slc4a4O88343 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc4a4O88343 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc4a4O88343 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.83■□□□□ 0.44
Slc4a4O88343 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.83■□□□□ 0.44
Slc4a4O88343 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc4a4O88343 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.83■□□□□ 0.44
Slc4a4O88343 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.83■□□□□ 0.44
Slc4a4O88343 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc4a4O88343 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc4a4O88343 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc4a4O88343 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc4a4O88343 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc4a4O88343 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Rpph1-201ENSMUST00000175096 319 ntBASIC17.82■□□□□ 0.44
Slc4a4O88343 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.82■□□□□ 0.44
Slc4a4O88343 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Slc4a4O88343 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.82■□□□□ 0.44
Slc4a4O88343 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.82■□□□□ 0.44
Slc4a4O88343 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Slc4a4O88343 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Slc4a4O88343 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc4a4O88343 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.81■□□□□ 0.44
Slc4a4O88343 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.81■□□□□ 0.44
Slc4a4O88343 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.81■□□□□ 0.44
Slc4a4O88343 Gm11025-201ENSMUST00000140773 466 ntBASIC17.81■□□□□ 0.44
Slc4a4O88343 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.81■□□□□ 0.44
Slc4a4O88343 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Slc4a4O88343 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.81■□□□□ 0.44
Slc4a4O88343 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Slc4a4O88343 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc4a4O88343 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Slc4a4O88343 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.8■□□□□ 0.44
Slc4a4O88343 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.8■□□□□ 0.44
Slc4a4O88343 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc4a4O88343 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc4a4O88343 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc4a4O88343 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc4a4O88343 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms