Protein–RNA interactions for Protein: O88255

Gm10509, Mszf57 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10509O88255 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10509O88255 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10509O88255 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10509O88255 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10509O88255 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Gm10509O88255 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Gm10509O88255 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Gm10509O88255 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10509O88255 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10509O88255 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.81□□□□□ -0.68
Gm10509O88255 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Gm10509O88255 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Gm10509O88255 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10509O88255 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Gm10509O88255 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Gm10509O88255 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Gm10509O88255 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.8□□□□□ -0.68
Gm10509O88255 Gm12134-201ENSMUST00000122109 520 ntBASIC10.8□□□□□ -0.68
Gm10509O88255 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.8□□□□□ -0.68
Gm10509O88255 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.8□□□□□ -0.68
Gm10509O88255 Gm18669-201ENSMUST00000216049 778 ntBASIC10.8□□□□□ -0.68
Gm10509O88255 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gm10509O88255 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.8□□□□□ -0.68
Gm10509O88255 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.8□□□□□ -0.68
Gm10509O88255 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gm10509O88255 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Gm37305-201ENSMUST00000195714 4279 ntBASIC10.8□□□□□ -0.68
Gm10509O88255 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.8□□□□□ -0.68
Gm10509O88255 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Gm14026-201ENSMUST00000120625 1789 ntBASIC10.8□□□□□ -0.68
Gm10509O88255 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Gm10509O88255 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC10.8□□□□□ -0.68
Gm10509O88255 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10509O88255 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10509O88255 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10509O88255 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10509O88255 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Gm10509O88255 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.79□□□□□ -0.68
Gm10509O88255 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10509O88255 Gm11780-201ENSMUST00000136880 516 ntBASIC10.79□□□□□ -0.68
Gm10509O88255 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10509O88255 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
Gm10509O88255 Gm4535-201ENSMUST00000182274 558 ntBASIC10.79□□□□□ -0.68
Gm10509O88255 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.79□□□□□ -0.68
Gm10509O88255 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10509O88255 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10509O88255 Gm10355-201ENSMUST00000097146 517 ntBASIC10.79□□□□□ -0.68
Gm10509O88255 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.79□□□□□ -0.68
Gm10509O88255 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10509O88255 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10509O88255 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10509O88255 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms