Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.61■□□□□ 0.25
Trdmt1O55055 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdmt1O55055 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.61■□□□□ 0.25
Trdmt1O55055 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdmt1O55055 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdmt1O55055 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trdmt1O55055 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdmt1O55055 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdmt1O55055 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trdmt1O55055 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdmt1O55055 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trdmt1O55055 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.6■□□□□ 0.25
Trdmt1O55055 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trdmt1O55055 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trdmt1O55055 Gm27533-201ENSMUST00000183800 152 ntBASIC16.6■□□□□ 0.25
Trdmt1O55055 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.6■□□□□ 0.25
Trdmt1O55055 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trdmt1O55055 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trdmt1O55055 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trdmt1O55055 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.6■□□□□ 0.25
Trdmt1O55055 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.6■□□□□ 0.25
Trdmt1O55055 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdmt1O55055 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Trdmt1O55055 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trdmt1O55055 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Trdmt1O55055 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.59■□□□□ 0.25
Trdmt1O55055 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trdmt1O55055 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.59■□□□□ 0.25
Trdmt1O55055 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdmt1O55055 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trdmt1O55055 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.58■□□□□ 0.25
Trdmt1O55055 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trdmt1O55055 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trdmt1O55055 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trdmt1O55055 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trdmt1O55055 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.58■□□□□ 0.24
Trdmt1O55055 Gm27680-201ENSMUST00000184192 160 ntBASIC16.58■□□□□ 0.24
Trdmt1O55055 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trdmt1O55055 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.58■□□□□ 0.24
Trdmt1O55055 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdmt1O55055 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trdmt1O55055 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdmt1O55055 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdmt1O55055 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.58■□□□□ 0.24
Trdmt1O55055 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.58■□□□□ 0.24
Trdmt1O55055 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdmt1O55055 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdmt1O55055 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdmt1O55055 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdmt1O55055 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdmt1O55055 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdmt1O55055 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdmt1O55055 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 App-207ENSMUST00000227737 2827 ntBASIC16.57■□□□□ 0.24
Trdmt1O55055 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trdmt1O55055 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trdmt1O55055 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trdmt1O55055 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Gm13823-201ENSMUST00000119930 345 ntBASIC16.57■□□□□ 0.24
Trdmt1O55055 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trdmt1O55055 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trdmt1O55055 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms