Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
BckdkO55028 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
BckdkO55028 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
BckdkO55028 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
BckdkO55028 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
BckdkO55028 Gm14140-201ENSMUST00000119999 995 ntBASIC14.07□□□□□ -0.16
BckdkO55028 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.07□□□□□ -0.16
BckdkO55028 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.07□□□□□ -0.16
BckdkO55028 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.07□□□□□ -0.16
BckdkO55028 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.07□□□□□ -0.16
BckdkO55028 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.07□□□□□ -0.16
BckdkO55028 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
BckdkO55028 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BckdkO55028 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
BckdkO55028 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BckdkO55028 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Gm8344-201ENSMUST00000119813 856 ntBASIC14.06□□□□□ -0.16
BckdkO55028 Gm5264-201ENSMUST00000190584 848 ntBASIC14.06□□□□□ -0.16
BckdkO55028 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BckdkO55028 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.06□□□□□ -0.16
BckdkO55028 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BckdkO55028 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
BckdkO55028 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.06□□□□□ -0.16
BckdkO55028 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BckdkO55028 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
BckdkO55028 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.05□□□□□ -0.16
BckdkO55028 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.05□□□□□ -0.16
BckdkO55028 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Gm11779-201ENSMUST00000118541 368 ntBASIC14.05□□□□□ -0.16
BckdkO55028 Gm11764-201ENSMUST00000120221 623 ntBASIC14.05□□□□□ -0.16
BckdkO55028 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
BckdkO55028 Gm27628-201ENSMUST00000184911 107 ntBASIC14.05□□□□□ -0.16
BckdkO55028 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.05□□□□□ -0.16
BckdkO55028 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.05□□□□□ -0.16
BckdkO55028 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BckdkO55028 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
BckdkO55028 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.05□□□□□ -0.16
BckdkO55028 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.05□□□□□ -0.16
BckdkO55028 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BckdkO55028 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BckdkO55028 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.05□□□□□ -0.16
BckdkO55028 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BckdkO55028 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
BckdkO55028 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
BckdkO55028 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms