Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.24■□□□□ 0.67
Cntnap1O54991 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntnap1O54991 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cntnap1O54991 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC19.23■□□□□ 0.67
Cntnap1O54991 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC19.23■□□□□ 0.67
Cntnap1O54991 AC155258.1-201ENSMUST00000219303 253 ntBASIC19.23■□□□□ 0.67
Cntnap1O54991 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cntnap1O54991 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cntnap1O54991 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cntnap1O54991 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC19.23■□□□□ 0.67
Cntnap1O54991 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cntnap1O54991 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Cntnap1O54991 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntnap1O54991 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC19.22■□□□□ 0.67
Cntnap1O54991 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Cntnap1O54991 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.22■□□□□ 0.67
Cntnap1O54991 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.22■□□□□ 0.67
Cntnap1O54991 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntnap1O54991 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC19.22■□□□□ 0.67
Cntnap1O54991 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap1O54991 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cntnap1O54991 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC19.21■□□□□ 0.67
Cntnap1O54991 Gm43758-201ENSMUST00000199500 367 ntBASIC19.21■□□□□ 0.67
Cntnap1O54991 AC134335.2-201ENSMUST00000227660 440 ntBASIC19.21■□□□□ 0.67
Cntnap1O54991 Gm10012-201ENSMUST00000078252 192 ntBASIC19.21■□□□□ 0.67
Cntnap1O54991 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap1O54991 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.21■□□□□ 0.67
Cntnap1O54991 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC19.21■□□□□ 0.67
Cntnap1O54991 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.21■□□□□ 0.67
Cntnap1O54991 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap1O54991 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC19.21■□□□□ 0.67
Cntnap1O54991 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap1O54991 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Cntnap1O54991 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap1O54991 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap1O54991 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap1O54991 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntnap1O54991 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.21■□□□□ 0.67
Cntnap1O54991 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cntnap1O54991 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC19.2■□□□□ 0.66
Cntnap1O54991 Gm12928-201ENSMUST00000117115 573 ntBASIC19.2■□□□□ 0.66
Cntnap1O54991 Gm15429-201ENSMUST00000151268 798 ntBASIC19.2■□□□□ 0.66
Cntnap1O54991 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC19.2■□□□□ 0.66
Cntnap1O54991 Gm19184-201ENSMUST00000196798 928 ntBASIC19.2■□□□□ 0.66
Cntnap1O54991 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC19.2■□□□□ 0.66
Cntnap1O54991 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC19.2■□□□□ 0.66
Cntnap1O54991 Gm19309-201ENSMUST00000218295 205 ntBASIC19.2■□□□□ 0.66
Cntnap1O54991 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cntnap1O54991 BC001981-202ENSMUST00000191393 1545 ntBASIC19.2■□□□□ 0.66
Cntnap1O54991 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Gm13050-201ENSMUST00000122149 1345 ntBASIC19.2■□□□□ 0.66
Cntnap1O54991 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntnap1O54991 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cntnap1O54991 Gm15782-201ENSMUST00000121073 445 ntBASIC19.19■□□□□ 0.66
Cntnap1O54991 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC19.19■□□□□ 0.66
Cntnap1O54991 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC19.19■□□□□ 0.66
Cntnap1O54991 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC19.19■□□□□ 0.66
Cntnap1O54991 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap1O54991 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap1O54991 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap1O54991 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap1O54991 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap1O54991 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap1O54991 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap1O54991 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.19■□□□□ 0.66
Cntnap1O54991 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms