Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Per2O54943 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Per2O54943 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Per2O54943 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.8■□□□□ 0.12
Per2O54943 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.8■□□□□ 0.12
Per2O54943 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Per2O54943 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Per2O54943 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.8■□□□□ 0.12
Per2O54943 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Per2O54943 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.8■□□□□ 0.12
Per2O54943 Gm37153-201ENSMUST00000193637 231 ntBASIC15.8■□□□□ 0.12
Per2O54943 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.8■□□□□ 0.12
Per2O54943 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.8■□□□□ 0.12
Per2O54943 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Per2O54943 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Per2O54943 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Per2O54943 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.8■□□□□ 0.12
Per2O54943 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Per2O54943 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Per2O54943 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Per2O54943 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Per2O54943 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Per2O54943 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Per2O54943 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Per2O54943 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Per2O54943 Gm7153-201ENSMUST00000117092 455 ntBASIC15.79■□□□□ 0.12
Per2O54943 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.79■□□□□ 0.12
Per2O54943 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Per2O54943 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Per2O54943 Gm10499-201ENSMUST00000174094 934 ntBASIC15.79■□□□□ 0.12
Per2O54943 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.79■□□□□ 0.12
Per2O54943 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.79■□□□□ 0.12
Per2O54943 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.79■□□□□ 0.12
Per2O54943 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.79■□□□□ 0.12
Per2O54943 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Per2O54943 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Per2O54943 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Per2O54943 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Per2O54943 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.78■□□□□ 0.12
Per2O54943 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.78■□□□□ 0.12
Per2O54943 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.78■□□□□ 0.12
Per2O54943 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Per2O54943 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Per2O54943 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Per2O54943 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Per2O54943 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Per2O54943 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Per2O54943 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Per2O54943 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Per2O54943 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.77■□□□□ 0.12
Per2O54943 Gm7230-201ENSMUST00000173026 815 ntBASIC15.77■□□□□ 0.12
Per2O54943 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms