Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccr6O54689 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.73□□□□□ -0.37
Ccr6O54689 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccr6O54689 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccr6O54689 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ccr6O54689 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccr6O54689 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccr6O54689 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccr6O54689 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccr6O54689 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccr6O54689 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccr6O54689 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccr6O54689 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccr6O54689 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Celf4-206ENSMUST00000224553 1729 ntBASIC12.72□□□□□ -0.37
Ccr6O54689 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccr6O54689 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.72□□□□□ -0.37
Ccr6O54689 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccr6O54689 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccr6O54689 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccr6O54689 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccr6O54689 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccr6O54689 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccr6O54689 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccr6O54689 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccr6O54689 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Ccr6O54689 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccr6O54689 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccr6O54689 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccr6O54689 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccr6O54689 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccr6O54689 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccr6O54689 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccr6O54689 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccr6O54689 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccr6O54689 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccr6O54689 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccr6O54689 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.7□□□□□ -0.38
Ccr6O54689 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccr6O54689 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccr6O54689 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccr6O54689 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.7□□□□□ -0.38
Ccr6O54689 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccr6O54689 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccr6O54689 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccr6O54689 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccr6O54689 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccr6O54689 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccr6O54689 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms