Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1i3O35627 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.27■□□□□ 0.2
Nr1i3O35627 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1i3O35627 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Nr1i3O35627 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1i3O35627 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1i3O35627 Gm13418-201ENSMUST00000119097 944 ntBASIC16.27■□□□□ 0.2
Nr1i3O35627 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.27■□□□□ 0.2
Nr1i3O35627 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.27■□□□□ 0.2
Nr1i3O35627 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1i3O35627 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.27■□□□□ 0.2
Nr1i3O35627 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Nr1i3O35627 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1i3O35627 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nr1i3O35627 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nr1i3O35627 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Nr1i3O35627 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nr1i3O35627 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nr1i3O35627 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nr1i3O35627 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nr1i3O35627 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Nr1i3O35627 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Nr1i3O35627 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nr1i3O35627 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.26■□□□□ 0.19
Nr1i3O35627 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nr1i3O35627 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.26■□□□□ 0.19
Nr1i3O35627 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.26■□□□□ 0.19
Nr1i3O35627 Ank2-226ENSMUST00000189368 339 ntBASIC16.26■□□□□ 0.19
Nr1i3O35627 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nr1i3O35627 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.26■□□□□ 0.19
Nr1i3O35627 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nr1i3O35627 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Nr1i3O35627 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Nr1i3O35627 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nr1i3O35627 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.26■□□□□ 0.19
Nr1i3O35627 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.25■□□□□ 0.19
Nr1i3O35627 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.25■□□□□ 0.19
Nr1i3O35627 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm37153-201ENSMUST00000193637 231 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44357-201ENSMUST00000195897 142 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm19658-201ENSMUST00000196231 138 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44367-201ENSMUST00000196836 138 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44350-201ENSMUST00000197197 138 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44390-201ENSMUST00000197533 144 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44313-201ENSMUST00000198018 138 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44486-201ENSMUST00000198508 138 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44314-201ENSMUST00000199263 138 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44394-201ENSMUST00000199558 138 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44484-201ENSMUST00000199873 138 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44466-201ENSMUST00000200264 138 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm44359-201ENSMUST00000200671 138 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Nr1i3O35627 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Nr1i3O35627 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.25■□□□□ 0.19
Nr1i3O35627 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.25■□□□□ 0.19
Nr1i3O35627 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nr1i3O35627 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nr1i3O35627 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms