Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clk2O35491 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.41■□□□□ 0.22
Clk2O35491 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clk2O35491 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clk2O35491 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clk2O35491 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clk2O35491 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.4■□□□□ 0.22
Clk2O35491 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clk2O35491 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Clk2O35491 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clk2O35491 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.4■□□□□ 0.22
Clk2O35491 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.4■□□□□ 0.22
Clk2O35491 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clk2O35491 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.4■□□□□ 0.22
Clk2O35491 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clk2O35491 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Clk2O35491 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clk2O35491 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.4■□□□□ 0.22
Clk2O35491 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Clk2O35491 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.39■□□□□ 0.21
Clk2O35491 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Clk2O35491 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.39■□□□□ 0.21
Clk2O35491 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.39■□□□□ 0.21
Clk2O35491 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.39■□□□□ 0.21
Clk2O35491 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Clk2O35491 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
Clk2O35491 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Clk2O35491 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clk2O35491 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clk2O35491 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clk2O35491 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.38■□□□□ 0.21
Clk2O35491 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Clk2O35491 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.38■□□□□ 0.21
Clk2O35491 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.38■□□□□ 0.21
Clk2O35491 Gm15920-201ENSMUST00000118998 402 ntBASIC16.38■□□□□ 0.21
Clk2O35491 Gm15483-201ENSMUST00000120338 456 ntBASIC16.38■□□□□ 0.21
Clk2O35491 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.38■□□□□ 0.21
Clk2O35491 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Clk2O35491 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.38■□□□□ 0.21
Clk2O35491 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.38■□□□□ 0.21
Clk2O35491 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.38■□□□□ 0.21
Clk2O35491 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clk2O35491 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Clk2O35491 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clk2O35491 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clk2O35491 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clk2O35491 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clk2O35491 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clk2O35491 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms