Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.25□□□□□ -0.13
Cx3cl1O35188 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Gm43514-201ENSMUST00000198852 424 ntBASIC14.25□□□□□ -0.13
Cx3cl1O35188 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.25□□□□□ -0.13
Cx3cl1O35188 Gm5364-201ENSMUST00000216789 889 ntBASIC14.25□□□□□ -0.13
Cx3cl1O35188 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cx3cl1O35188 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.24□□□□□ -0.13
Cx3cl1O35188 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.24□□□□□ -0.13
Cx3cl1O35188 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.24□□□□□ -0.13
Cx3cl1O35188 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.24□□□□□ -0.13
Cx3cl1O35188 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cl1O35188 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.23□□□□□ -0.13
Cx3cl1O35188 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.23□□□□□ -0.13
Cx3cl1O35188 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Gm14140-201ENSMUST00000119999 995 ntBASIC14.23□□□□□ -0.13
Cx3cl1O35188 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Cx3cl1O35188 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms