Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm21880-201ENSMUST00000187275 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21826-201ENSMUST00000187451 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21198-201ENSMUST00000188393 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21749-201ENSMUST00000189343 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21901-201ENSMUST00000189568 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm29424-201ENSMUST00000189716 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm28599-201ENSMUST00000189838 694 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21867-201ENSMUST00000189917 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm29269-201ENSMUST00000190087 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21722-201ENSMUST00000190153 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm28423-201ENSMUST00000190701 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21899-201ENSMUST00000190745 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21910-201ENSMUST00000191163 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21849-201ENSMUST00000191571 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm28678-201ENSMUST00000191593 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm20910-201ENSMUST00000193268 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21871-201ENSMUST00000194621 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm6218-201ENSMUST00000219812 628 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Mir1897-201ENSMUST00000122581 272 ntBASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Gm43703-201ENSMUST00000200523 763 ntBASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Gm45098-201ENSMUST00000207179 657 ntBASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
B020004C17RikJ3QP07 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Gm14928-201ENSMUST00000120198 477 ntBASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Gm3436-201ENSMUST00000179930 840 ntBASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Gm46209-201ENSMUST00000217912 553 ntBASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
B020004C17RikJ3QP07 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
B020004C17RikJ3QP07 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
B020004C17RikJ3QP07 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
B020004C17RikJ3QP07 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
B020004C17RikJ3QP07 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
B020004C17RikJ3QP07 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
B020004C17RikJ3QP07 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.78■□□□□ 0.28
B020004C17RikJ3QP07 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms