Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdh9F8VPK8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Gm12134-201ENSMUST00000122109 520 ntBASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh9F8VPK8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh9F8VPK8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh9F8VPK8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh9F8VPK8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh9F8VPK8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh9F8VPK8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh9F8VPK8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh9F8VPK8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh9F8VPK8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh9F8VPK8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdh9F8VPK8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Gm6296-201ENSMUST00000222599 943 ntBASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh9F8VPK8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh9F8VPK8 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.49■□□□□ 0.07
Pcdh9F8VPK8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh9F8VPK8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh9F8VPK8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms