Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4aE9Q735 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.12■□□□□ 0.49
Ube4aE9Q735 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube4aE9Q735 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.11■□□□□ 0.49
Ube4aE9Q735 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Gm25144-201ENSMUST00000179561 110 ntBASIC18.11■□□□□ 0.49
Ube4aE9Q735 Gm25352-201ENSMUST00000179815 110 ntBASIC18.11■□□□□ 0.49
Ube4aE9Q735 Gm28630-201ENSMUST00000187806 498 ntBASIC18.11■□□□□ 0.49
Ube4aE9Q735 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Gm38294-201ENSMUST00000192831 381 ntBASIC18.11■□□□□ 0.49
Ube4aE9Q735 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.11■□□□□ 0.49
Ube4aE9Q735 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.11■□□□□ 0.49
Ube4aE9Q735 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Ube4aE9Q735 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.11■□□□□ 0.49
Ube4aE9Q735 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube4aE9Q735 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.11■□□□□ 0.49
Ube4aE9Q735 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Gm13453-201ENSMUST00000118708 357 ntBASIC18.1■□□□□ 0.49
Ube4aE9Q735 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Gm17837-201ENSMUST00000186435 985 ntBASIC18.1■□□□□ 0.49
Ube4aE9Q735 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.1■□□□□ 0.49
Ube4aE9Q735 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.1■□□□□ 0.49
Ube4aE9Q735 Prob1-201ENSMUST00000097619 3021 ntBASIC18.1■□□□□ 0.49
Ube4aE9Q735 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube4aE9Q735 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.1■□□□□ 0.49
Ube4aE9Q735 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Gm8410-201ENSMUST00000117225 605 ntBASIC18.09■□□□□ 0.49
Ube4aE9Q735 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms