Protein–RNA interactions for Protein: E9PUP1

Syde2, Synapse defective 1, Rho GTPase, homolog 2 (C. elegans), mousemouse

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syde2E9PUP1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Syde2E9PUP1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syde2E9PUP1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Syde2E9PUP1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syde2E9PUP1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Syde2E9PUP1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syde2E9PUP1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syde2E9PUP1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syde2E9PUP1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.8■□□□□ 0.6
Syde2E9PUP1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.8■□□□□ 0.6
Syde2E9PUP1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syde2E9PUP1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.8■□□□□ 0.6
Syde2E9PUP1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Syde2E9PUP1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Gm13823-201ENSMUST00000119930 345 ntBASIC18.79■□□□□ 0.6
Syde2E9PUP1 Gm14719-201ENSMUST00000121891 340 ntBASIC18.79■□□□□ 0.6
Syde2E9PUP1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Gm7730-201ENSMUST00000212486 454 ntBASIC18.79■□□□□ 0.6
Syde2E9PUP1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.79■□□□□ 0.6
Syde2E9PUP1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.79■□□□□ 0.6
Syde2E9PUP1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.79■□□□□ 0.6
Syde2E9PUP1 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.79■□□□□ 0.6
Syde2E9PUP1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Syde2E9PUP1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Gm16215-201ENSMUST00000161990 637 ntBASIC18.78■□□□□ 0.6
Syde2E9PUP1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.78■□□□□ 0.6
Syde2E9PUP1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms