Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm27331-201ENSMUST00000183705 60 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm3508-201ENSMUST00000186012 792 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 AC124457.1-201ENSMUST00000198845 120 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm8959-201ENSMUST00000213150 571 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 AC149588.3-201ENSMUST00000227515 150 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm42690-201ENSMUST00000197921 1836 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm2606-201ENSMUST00000100754 1002 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm12537-201ENSMUST00000119266 1002 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm12070-201ENSMUST00000119551 1002 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm12671-201ENSMUST00000119978 1002 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm13292-201ENSMUST00000120014 1000 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm10359-201ENSMUST00000180167 1002 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm12033-201ENSMUST00000180654 1002 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm5559-201ENSMUST00000180755 1002 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm2467-201ENSMUST00000182266 1010 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm7118-201ENSMUST00000200167 1003 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm7293-201ENSMUST00000216682 1007 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm6222-201ENSMUST00000120787 396 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Mir1943-201ENSMUST00000158276 73 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Gm14026-201ENSMUST00000120625 1789 ntBASIC4.3□□□□□ -1.72
Hmcn1D3YXG0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Gm12201-201ENSMUST00000120657 1234 ntBASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Gm14017-201ENSMUST00000121934 386 ntBASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Gm29396-201ENSMUST00000185659 716 ntBASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 BC051077-201ENSMUST00000181440 2044 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Gm2383-201ENSMUST00000181461 807 ntBASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Mir6958-201ENSMUST00000184207 73 ntBASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Gm27486-201ENSMUST00000184923 80 ntBASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Gm8597-201ENSMUST00000191525 1109 ntBASIC4.29□□□□□ -1.72
Hmcn1D3YXG0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms