Protein–RNA interactions for Protein: B2RRE7

Otud4, OTU domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud4B2RRE7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.35□□□□□ -0.11
Otud4B2RRE7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.35□□□□□ -0.11
Otud4B2RRE7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.35□□□□□ -0.11
Otud4B2RRE7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.35□□□□□ -0.11
Otud4B2RRE7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.34□□□□□ -0.11
Otud4B2RRE7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Otud4B2RRE7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Otud4B2RRE7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Otud4B2RRE7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Otud4B2RRE7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
Otud4B2RRE7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.33□□□□□ -0.12
Otud4B2RRE7 Gm14494-201ENSMUST00000118786 435 ntBASIC14.33□□□□□ -0.12
Otud4B2RRE7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Gm24513-201ENSMUST00000174964 138 ntBASIC14.33□□□□□ -0.12
Otud4B2RRE7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.33□□□□□ -0.12
Otud4B2RRE7 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.33□□□□□ -0.12
Otud4B2RRE7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 AV026068-213ENSMUST00000223675 1171 ntBASIC14.33□□□□□ -0.12
Otud4B2RRE7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud4B2RRE7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Otud4B2RRE7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud4B2RRE7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.32□□□□□ -0.12
Otud4B2RRE7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Otud4B2RRE7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Otud4B2RRE7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud4B2RRE7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud4B2RRE7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.32□□□□□ -0.12
Otud4B2RRE7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud4B2RRE7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Otud4B2RRE7 Gm23935-201ENSMUST00000102303 57 ntBASIC14.32□□□□□ -0.12
Otud4B2RRE7 Gm24270-201ENSMUST00000102326 57 ntBASIC14.32□□□□□ -0.12
Otud4B2RRE7 Gm14140-201ENSMUST00000119999 995 ntBASIC14.32□□□□□ -0.12
Otud4B2RRE7 Gm14822-201ENSMUST00000122247 291 ntBASIC14.32□□□□□ -0.12
Otud4B2RRE7 Gm12497-201ENSMUST00000138778 237 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms