Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Usp42B2RQC2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Gm12260-201ENSMUST00000122447 411 ntBASIC17.68■□□□□ 0.42
Usp42B2RQC2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Gm2272-201ENSMUST00000194903 582 ntBASIC17.68■□□□□ 0.42
Usp42B2RQC2 Gm45747-201ENSMUST00000212203 999 ntBASIC17.68■□□□□ 0.42
Usp42B2RQC2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp42B2RQC2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.68■□□□□ 0.42
Usp42B2RQC2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Gm16198-201ENSMUST00000118766 670 ntBASIC17.67■□□□□ 0.42
Usp42B2RQC2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.67■□□□□ 0.42
Usp42B2RQC2 Gm43514-201ENSMUST00000198852 424 ntBASIC17.67■□□□□ 0.42
Usp42B2RQC2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Thap2-203ENSMUST00000218989 527 ntBASIC17.67■□□□□ 0.42
Usp42B2RQC2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp42B2RQC2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.66■□□□□ 0.42
Usp42B2RQC2 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.66■□□□□ 0.42
Usp42B2RQC2 Efs-202ENSMUST00000227037 2540 ntBASIC17.66■□□□□ 0.42
Usp42B2RQC2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp42B2RQC2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.65■□□□□ 0.42
Usp42B2RQC2 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.65■□□□□ 0.42
Usp42B2RQC2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp42B2RQC2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms