Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col6a4A2AX52 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.78□□□□□ -0.36
Col6a4A2AX52 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.78□□□□□ -0.36
Col6a4A2AX52 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a4A2AX52 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Col6a4A2AX52 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.77□□□□□ -0.36
Col6a4A2AX52 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Col6a4A2AX52 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 Gm14928-201ENSMUST00000120198 477 ntBASIC12.77□□□□□ -0.36
Col6a4A2AX52 Gm15487-201ENSMUST00000122373 465 ntBASIC12.77□□□□□ -0.36
Col6a4A2AX52 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.77□□□□□ -0.36
Col6a4A2AX52 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.77□□□□□ -0.36
Col6a4A2AX52 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a4A2AX52 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.77□□□□□ -0.37
Col6a4A2AX52 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Gm6415-201ENSMUST00000118488 348 ntBASIC12.77□□□□□ -0.37
Col6a4A2AX52 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.77□□□□□ -0.37
Col6a4A2AX52 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a4A2AX52 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.76□□□□□ -0.37
Col6a4A2AX52 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.76□□□□□ -0.37
Col6a4A2AX52 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.76□□□□□ -0.37
Col6a4A2AX52 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.76□□□□□ -0.37
Col6a4A2AX52 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.76□□□□□ -0.37
Col6a4A2AX52 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.76□□□□□ -0.37
Col6a4A2AX52 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a4A2AX52 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a4A2AX52 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms